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gpu_server_setup
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setup_apps_conda seams to work

This commit is contained in:
Nicolas 2022-06-23 16:02:50 +02:00
parent cc5980d095
commit e4f762a08e
1 changed files with 15 additions and 7 deletions
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setup_apps_conda.sh
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@ -47,7 +47,7 @@ echo "create virtualenv and install JupyterHub..."
python3 -m venv /opt/jupyterhub/ python3 -m venv /opt/jupyterhub/
/opt/jupyterhub/bin/python3 -m pip install wheel /opt/jupyterhub/bin/python3 -m pip install wheel
/opt/jupyterhub/bin/python3 -m pip install jupyterhub jupyterlab /opt/jupyterhub/bin/python3 -m pip install jupyterhub jupyterlab
/opt/jupyterhub/bin/python3 -m pip install ipywidgets /opt/jupyterhub/bin/python3 -m pip install ipywidgets jupyterlab-git jupyter-server-proxy
npm install -g configurable-http-proxy npm install -g configurable-http-proxy
echo "setup jupyterhub config..." echo "setup jupyterhub config..."
@ -84,15 +84,22 @@ apt-get install -y conda
#symlinking the conda shell setup script to the profile ‘drop in’ folder so that it gets run on login: #symlinking the conda shell setup script to the profile ‘drop in’ folder so that it gets run on login:
ln -s /opt/conda/etc/profile.d/conda.sh /etc/profile.d/conda.sh ln -s /opt/conda/etc/profile.d/conda.sh /etc/profile.d/conda.sh
mkdir /opt/conda/envs/ mkdir -p /opt/conda/envs/
/opt/conda/bin/conda create --prefix /opt/conda/envs/python python=3.7 ipykernel /opt/conda/bin/conda create --prefix /opt/conda/envs/python python=3.7 ipykernel
#/opt/conda/envs/python/bin/python -m ipykernel install --prefix /usr/local/ --name 'python' --display-name "Python (default)" /opt/conda/envs/python/bin/python -m ipykernel install --prefix /usr/local/ --name 'python' --display-name "Python (default)"
/opt/conda/envs/python/bin/python -m ipykernel install --prefix=/opt/jupyterhub/ --name 'python' --display-name "Python (default)" #/opt/conda/envs/python/bin/python -m ipykernel install --prefix=/opt/jupyterhub/ --name 'python' --display-name "Python (default)"
#install ofen used python packages for default environment
/opt/conda/bin/conda install h5py tqdm pandas pillow matplotlib ipympl opencv-python --yes --name python
/opt/conda/bin/conda install cantera --channel cantera --yes --name python
#users have to setup there kernel like this: #users have to setup there kernel like this:
#/opt/conda/envs/python/bin/python -m ipykernel install --name 'python-my-env' --display-name "Python My Env" #create conder enviroment:
#conda create ipykernel --name mypersonal_enviroment
#python -m ipykernel install --user --name mypersonal_enviroment --display-name "Python My Env"
#conda install --yes jupyterhub jupyterlab notebook configurable-http-proxy jupyterlab-git jupyter-server-proxy #conda install --yes jupyterhub jupyterlab notebook configurable-http-proxy jupyterlab-git jupyter-server-proxy
@ -117,8 +124,8 @@ mkdir /opt/conda/envs/
#on http://0.0.0.0:19999 #on http://0.0.0.0:19999
#echo "Install gpuview..." #echo "Install gpuview..."
#python3 -m pip install gpuview #/opt/jupyterhub/bin/python3 -m pip install gpuview
#gpuview service --host 127.0.0.1 --port 9988 #/opt/jupyterhub/bin/python3 -m gpuview service --host 127.0.0.1 --port 9988 <-- fails
#echo "Disable services that delays startup by wating for network connectivity..." #echo "Disable services that delays startup by wating for network connectivity..."
#systemctl disable cloud-config #systemctl disable cloud-config
@ -128,6 +135,7 @@ mkdir /opt/conda/envs/
echo "Start JupyterHub..." echo "Start JupyterHub..."
systemctl start jupyterhub.service systemctl start jupyterhub.service
#sudo systemctl restart jupyterhub
echo "" echo ""
echo "Setup successfully finished" echo "Setup successfully finished"