gpu_server_setup/work-environment.yml

name: work
channels:
  - cantera
  - conda-forge
  - nodefaults
  - bioconda #required for nmrglue (on anaconda.org)
dependencies:
  - python
  - matplotlib
  - numpy
  - pandas
  - pytables
  - nptdms # for Labview TDMS files
  - openpyxl  # read/write excel files
  - snappy # for now, fixes dependency error of pytables  
  - scipy
  - scikit-learn
  - spyder
  - pillow
  - notebook
#  - jupyterthemes #not JupyterLab compatible
#  - jupyter_contrib_nbextensions #not JupyterLab compatible
#  - jupyter_nbextensions_configurator #not JupyterLab compatible
  - nbconvert
#  - nbdime #allredy supported by git extention for jupyterlab
  - ipypublish
  - jupyter-book>=0.12.1
  - sqlalchemy~=1.3.12  # for jupyter-cache - try to update later...
#  - pyppeteer
  - cantera
  - h5py  
  - cvxpy
#  - jupyterlab
#  - jupyterlab-git
  - pip
  - pip:
    - impedance
    - emd
    - pyschedule
    - pulp==2.0
    - ProcessScheduler
#  - rise  #not JupyterLab compatible
  - plotly
  - jupyter_pivottablejs
#  - blaze #blaze -> python[version='2.7.*|3.5.*|3.6.*'] (Your python: python=3.7)
  - tqdm #easy to use progress bar -> tqdm(iterable)
  - odfpy #open OpenDocument spread sheed files with pandas
  - psycopg2 #PostgreSQL adapter
  - nmrglue #working with NMR data in Python
  - ipykernel
  - tabulate
  - sympy
changed setup_apps_miniforge to use work-environment.yml 2022-09-19 11:31:29 +00:00			`name: work`
			`channels:`
			`- cantera`
			`- conda-forge`
			`- nodefaults`
			`- bioconda #required for nmrglue (on anaconda.org)`
			`dependencies:`
			`- python`
			`- matplotlib`
			`- numpy`
			`- pandas`
			`- pytables`
			`- nptdms # for Labview TDMS files`
			`- openpyxl # read/write excel files`
			`- snappy # for now, fixes dependency error of pytables`
			`- scipy`
			`- scikit-learn`
			`- spyder`
			`- pillow`
			`- notebook`
corrections ported from tested Docker version 2022-09-19 11:49:39 +00:00			`# - jupyterthemes #not JupyterLab compatible`
			`# - jupyter_contrib_nbextensions #not JupyterLab compatible`
			`# - jupyter_nbextensions_configurator #not JupyterLab compatible`
changed setup_apps_miniforge to use work-environment.yml 2022-09-19 11:31:29 +00:00			`- nbconvert`
corrections ported from tested Docker version 2022-09-19 11:49:39 +00:00			`# - nbdime #allredy supported by git extention for jupyterlab`
changed setup_apps_miniforge to use work-environment.yml 2022-09-19 11:31:29 +00:00			`- ipypublish`
			`- jupyter-book>=0.12.1`
			`- sqlalchemy~=1.3.12 # for jupyter-cache - try to update later...`
			`# - pyppeteer`
			`- cantera`
			`- h5py`
			`- cvxpy`
corrections ported from tested Docker version 2022-09-19 11:49:39 +00:00			`# - jupyterlab`
			`# - jupyterlab-git`
changed setup_apps_miniforge to use work-environment.yml 2022-09-19 11:31:29 +00:00			`- pip`
			`- pip:`
			`- impedance`
			`- emd`
			`- pyschedule`
			`- pulp==2.0`
			`- ProcessScheduler`
corrections ported from tested Docker version 2022-09-19 11:49:39 +00:00			`# - rise #not JupyterLab compatible`
changed setup_apps_miniforge to use work-environment.yml 2022-09-19 11:31:29 +00:00			`- plotly`
corrections ported from tested Docker version 2022-09-19 11:49:39 +00:00			`- jupyter_pivottablejs`
			`# - blaze #blaze -> python[version='2.7.\|3.5.\|3.6.*'] (Your python: python=3.7)`
			`- tqdm #easy to use progress bar -> tqdm(iterable)`
changed setup_apps_miniforge to use work-environment.yml 2022-09-19 11:31:29 +00:00			`- odfpy #open OpenDocument spread sheed files with pandas`
			`- psycopg2 #PostgreSQL adapter`
			`- nmrglue #working with NMR data in Python`
corrections ported from tested Docker version 2022-09-19 11:49:39 +00:00			`- ipykernel`
sympy in work-environment.yml added sympy for symbolic math added 2022-11-14 13:50:18 +00:00			`- tabulate`
			`- sympy`